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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930006.1_cds_XP_016477166.1_68926
CDS Infomation

[gene=LOC107798664] [db_xref=GeneID:107798664] [protein=golgin candidate 1-like] [protein_id=XP_016477166.1] [location=join(21801..21828,23323..23403,23819..23868,23947..24606,24688..24750,25592..25669,25764..25967,26337..26393,26506..26580,26935..27006,27762..27824,27962..28060,28606..28683,28832..28900,29384..29431,29528..29623,29745..29821,29987..30032,30184..30282,30368..30412,31488..31559)] [gbkey=CDS]
Sequence

ATGGCTTCGTGGCTTCGAGCTGCTGAAGATTTGTTTGAAGTTGTAGATAAGAGGGCAAAG
AGTGTAGTCGGCGAGAAATCCGATGAACAGCCCAATGTTCAGAGTCCAGTTCCGAATGAA
AAAGGATCTCAACCAAAAAGGTCACGGCAAAAAAAGAAGCCTCAAAAACGACTCTCTTCT
AATGAACCTTCAGAAACAGCTAATTTTGAAAGGGAACAAGCTAGCCAAGGGATGTCACAA
TCAGATTCCGTCTCTGATAAAGACAAAGCTATCCTACTTACTGAAAACAGTGGGACAAAT
CCAGGTAGTCCTAGTGGCAAAACTAGCACCGAAGATAAGCTAAAAATTGCTGAAGATGGT
GCCTTGTTAGACACTCCTATATCTGAAACAACCTCTAACAATGAGTTAAACCATCATGCT
GATCACACGGAAGTTGCAGAACCTGTTGATGTAAAAATTGTGAGTTCAGAATCTACTGGT
GAGCATACCAGCGGAAACACCTCAGATGTTCCTGGAGAGACTCCTTCGTTGCCTGCTGTG
AAAGTGGTTGATGCTGTGCAGGACAACTCTCCAGTAGATTCCAGTCAAAACACAGTTCTT
CGTGGTGCTGGATCTCCTGCAAACTTTGAGCAGGAAAGATCTAAGTCTTTAACTGCAGAT
GAACCTGTTAAAGTTGATAGACAGTTGAAGGATGATAATACCAATGCTGAACCAAATCCT
GACCAGAAGCTGCTTCTAAAACATAAAACTGTTAATCCGGACAAGAAGCAGCTTCCAGAA
CATAATACTGCCACGAAAGTACAAGAGCAACTTGATGAGGCTCAGGGACTGCTTAAAAAT
GCAACTTCTACCGGTCAGTCAAAAGAAGCACGGTTAGCCCGTGTTTGTGCTGGACTTTCA
TCACGTCTTCAGGAGTATAAATCTGAAAATGCTCAGCTAGAGGAGCTTCTTGTTGCAGAG
AGGGAGTTGAGTAAATCTTGTGAGGCTCGGATAAAGCAGCTTCAGAAAGATTTATCTGCA
GCCAAAAAAGAGGTGTCCAAAGCAGAGTCCAGTATGGCTGAGGCTCTTGCTGCAAAGAAT
GCTGAAATTGAGGCTCTTGTTAGTTCTACAGATGCACTTAAGAAGCAAGCTGCACTATCC
GAAGGAAACCTGGCATCCTTGCAGGCTAATATGGAGTCTTTAATGAGAAACAGGGAACTA
ACAGAGACAAGGATGATGCAAGCTTTACGGGAGGAGCTGGGTGCTGCCGAGCGAAGAGCA
GAAGAAGAGCGTGCTGCTCATAATGCTACCAAAAAGGCTTCTATGGAAAGGGAGGTAGAA
CTGGAGCACCGAGCTCTAGAGGCATCCACAGCCTTGGCCAGGGCGCAGAGAACAGCTGAT
GAAAGGACTGCAAAGGCAACAGAGCTTGAGCATAAGGTGGCACTGCTTGAGGTTGAATGT
GCAACTCTCAATCAAGAACTGCAAGACATGGAAGCTCGTGCTCGCCGTGGACAAAAAAAA
TCCTCAGAAGAGGCAAATCAAGTGCATCAGATGCAGGCATGGCAAGAAGAAGTGGAGCGT
GCACGCCAAGGTCAGAGGGAGGCTGAAAGCAAGCTTGCTTCTTTGGAGGCTGAAATGCAA
AAGCTAAGAGTTGAAACGGCTGCGATGAAAAGGGATGCTGAACATTACTCTCGCCAGGAG
CACGTGGAACTTGAAAAGCGGTATCGTGAATTAACTGATCTATTGTATTACAAGCAAACA
CAGCTTGAAGCCATGGCCAGTGAAAAAGCCGCGGCTGAGTTTCAGTTAGAGAAGGAAGTA
AAGCGTCTTCAGGAAGTACAGTTAGAAGCTGAAAGAAACAGAGCTTCTCGTCGAGCATCA
TCCTCATGGGAGGAAGACACGGACATCAAAGCACTTGAGCCTCTCCCTTTGCATCACCGT
CACATGACAGGGGCCACGGTACAGTTACAGAAGGCCGCAAAGCTTCTGGATACCGGGGCA
GTCAGGGCAACACGATTTCTCTGGCGATATCCAACTGCTCGAGTTATCTTGCTTTTTTAT
CTGGTATTTGTCCATTTGTTCTTGATGTATCTCTTGCATCGCCTTCAGGAACAAGCTGAT
ACTTTTGCATCTAAAGAAGTTGCAATATCCATGGGGCTCGCCAACCAGACCTTACCATGA

Peptide Sequence

PEP ID

XP_016477166.1
PEP Infomation

PREDICTED: golgin candidate 1-like [Nicotiana tabacum]
Sequence

MASWLRAAEDLFEVVDKRAKSVVGEKSDEQPNVQSPVPNEKGSQPKRSRQKKKPQKRLSS
NEPSETANFEREQASQGMSQSDSVSDKDKAILLTENSGTNPGSPSGKTSTEDKLKIAEDG
ALLDTPISETTSNNELNHHADHTEVAEPVDVKIVSSESTGEHTSGNTSDVPGETPSLPAV
KVVDAVQDNSPVDSSQNTVLRGAGSPANFEQERSKSLTADEPVKVDRQLKDDNTNAEPNP
DQKLLLKHKTVNPDKKQLPEHNTATKVQEQLDEAQGLLKNATSTGQSKEARLARVCAGLS
SRLQEYKSENAQLEELLVAERELSKSCEARIKQLQKDLSAAKKEVSKAESSMAEALAAKN
AEIEALVSSTDALKKQAALSEGNLASLQANMESLMRNRELTETRMMQALREELGAAERRA
EEERAAHNATKKASMEREVELEHRALEASTALARAQRTADERTAKATELEHKVALLEVEC
ATLNQELQDMEARARRGQKKSSEEANQVHQMQAWQEEVERARQGQREAESKLASLEAEMQ
KLRVETAAMKRDAEHYSRQEHVELEKRYRELTDLLYYKQTQLEAMASEKAAAEFQLEKEV
KRLQEVQLEAERNRASRRASSSWEEDTDIKALEPLPLHHRHMTGATVQLQKAAKLLDTGA
VRATRFLWRYPTARVILLFYLVFVHLFLMYLLHRLQEQADTFASKEVAISMGLANQTLP

Transcript Sequence

Gene sequence data has not been registered.